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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916430.1_cds_XP_016466143.1_59026
CDS Infomation

[gene=LOC107788918] [db_xref=GeneID:107788918] [protein=glucose-6-phosphate isomerase 1, chloroplastic-like isoform X2] [protein_id=XP_016466143.1] [location=complement(join(17588..17722,17815..17881,18009..18087,18320..18476,18901..19039,19197..19249,20190..20297,20396..20464,20690..20755,21340..21483,21764..21847,21953..22051,22895..23011,23474..23800,23834..24034))] [gbkey=CDS]
Sequence

ATGGCTTCGTCTTCACTCTCTAGCATTTACTCCCCTTCTTCTTCATCATCTTTCAAAACT
GAAGTGAAATCAATTCACAAAATCACTTCATCCCAATTGGGTTCAATCTCCCTGCCCGGA
AAATCAAGATTCCATGTTCACGCGGTAGCGCGTGAGTTGTCCACCGGCAACAACAACGAC
GTCTTATTGAAGAAGGAGAACATTGGGTTAGAGAAAGACCCAAAGTCCCTATGGAAGAGA
TATGTAGACTGGCTTTACCAGCACAAGGAGTTGGGCTTGTATTTGGATATCAGTCGGGTC
GGGTTTTCCGACGAGTTTCTTGAGGAAATGGAGCCCCGTTTGCAGAAGGCGTTTAAGGAC
ATGGTGAAATTGGAAAAAGGTGCAATTGCAAACCCAGATGAGGGAAGAATGGTGGGTCAT
TATTGGCTGAGGAGTCCTCATCTTGCTCCTAACTCATTTCTCAAGTTGCAGATTGAGAAT
ACTCTTGAATCTGTTTGTCGGTTTGCTAATGATGTCGTCAGTGGTAAGATCAAGACTCCT
TCTGGTAGCCTATTTACGCAAATTCTTTCTGTTGGAATCGGTGGTTCAGCGCTTGGACCG
CAATTTGTGGCTGAGGCATTGGCTCCTGACAACCCTCCTCTGAAGATAAGATTCATCGAC
AACACAGATCCAGCAGGCATTGATCATCAAATTGCACAACTTGGGCCTGAGCTGGCTTCA
ACACTTGTTATTGTTATTTCAAAGAGTGGAGGCACGCCAGAAACCCGAAATGGCTTGTTA
GAAGTTCAGAAGGCCTTTCGTGAAGCTGGCCTGGAATTTGCAAAACAGGGTGTTGCCATT
ACACAAGAGAACTCTTTACTCGACAACACCGCTAGAATTGAGGGTTGGTTAGCCAGATTC
CCTATGTTTGATTGGGTGGGTGGAAGAACCTCTGAATTGTCTGCAGTTGGTTTACTTCCG
GCTGCACTTCAGGGAATTAATATTAGAGAGATGCTTACTGGCGCTGCATTGATGGACGAA
GCAAACAGGACAACTGTGGTTCGGGAAAACCCAGCAGCTCTGCTTGCTTTGTGTTGGTAC
TGGGCCACTGATGGAGTTGGATCGAAGGATATGGTTGTCCTCCCGTACAAGGACAGTTTA
TTGCTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTTGGAAAAGAGTTTGAC
CTGGACGGAAACCGGGTGAATCAAGGGATCAGCGTTTATGGAAACAAAGGGAGTACAGAT
CAGCATGCCTATATTCAACAACTCCGAGAAGGCGTGCATAATTTCTTTGCAACATTTATT
GAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGTGTTACCTGT
GGTGACTACCTCTTTGGAATGTTACAGGGAACAAGGTCGGCTCTCTATGCGAACGATAGA
GAGTCCATCACAGTCACTGTGCAGGAGGTGACACCTAGATCTGTTGGAGCTCTAGTAGCA
CTCTACGAGCGAGCTGTTGGGATTTATGCCTCACTTGTCAACATTAACGCTTATCATCAA
CCTGGTGTGGAAGCTGGCAAAAAAGCCGCTGGAGAAGTTCTTGCGCTTCAAAAGCGTGTC
CTTGCTGTACTCAATGAGGCCAGCTGTAAAGAGCCTGTTGAACCACTTACGCTAGAAGAA
ATAGCTGATCGTTGCCATTGTGAAGAAGATATCGAAATGATATATAAGATTATTGCACAC
ATGGCTGCTAATGACAGAGCTCTTATTGCCGAAGGTAGTTGTGGTTCTCCTCGGAGTGTA
AAAGTTTATCTGGGCGAGTGTAATGTTGACGAGTTATATGCCTAG

Peptide Sequence

PEP ID

XP_016466143.1
PEP Infomation

PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MASSSLSSIYSPSSSSSFKTEVKSIHKITSSQLGSISLPGKSRFHVHAVARELSTGNNND
VLLKKENIGLEKDPKSLWKRYVDWLYQHKELGLYLDISRVGFSDEFLEEMEPRLQKAFKD
MVKLEKGAIANPDEGRMVGHYWLRSPHLAPNSFLKLQIENTLESVCRFANDVVSGKIKTP
SGSLFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS
TLVIVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTARIEGWLARF
PMFDWVGGRTSELSAVGLLPAALQGINIREMLTGAALMDEANRTTVVRENPAALLALCWY
WATDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTD
QHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANDR
ESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRV
LAVLNEASCKEPVEPLTLEEIADRCHCEEDIEMIYKIIAHMAANDRALIAEGSCGSPRSV
KVYLGECNVDELYA

Transcript Sequence

Gene sequence data has not been registered.